Sunflower query

Joy
Guest

Sunflower query Dec 17, 2020 15:09:38 GMT -5

Quote

Post by Joy on Dec 17, 2020 15:09:38 GMT -5

Hi there,

I am trying to run a list of Sunflower genes. I have the id format in XP_#########.#. These can be found in NCBI and converted to LOC########## format. But either of them I could not get any result out of DAVID. Is it just because Sunflower database is not covered by DAVID?

Thanks!
Geng

Brad
DAVID Bioinformatics Team

Posts: 67

Sunflower query Dec 17, 2020 16:08:14 GMT -5

Quote

Post by Brad on Dec 17, 2020 16:08:14 GMT -5

Hi Geng,

I queried the production database and it shows that there are only 132 genes for taxonomy id 4232.

The good news is that we are currently working on an update which contains 83,313 genes. We're hoping to make a beta version with this update available in the beginning of the new year.

Regards, Brad

Joy
Guest

Sunflower query Dec 18, 2020 15:52:14 GMT -5

Quote

Post by Joy on Dec 18, 2020 15:52:14 GMT -5

Dec 17, 2020 16:08:14 GMT -5 Brad said:

Hi Geng,

I queried the production database and it shows that there are only 132 genes for taxonomy id 4232.

The good news is that we are currently working on an update which contains 83,313 genes. We're hoping to make a beta version with this update available in the beginning of the new year.

Regards, Brad

Thank you for your help!

Post by Joy on Dec 17, 2020 15:09:38 GMT -5

Post by Brad on Dec 17, 2020 16:08:14 GMT -5

Post by Joy on Dec 18, 2020 15:52:14 GMT -5

Quick Reply